Understanding Silhouette Diagnostics for Clustering
Clustering
R
Statistics
A gentle introduction to silhouette-based methods for evaluating cluster quality — from classical approaches to density-based extensions.
What Are Silhouette Diagnostics?
Silhouette analysis is one of the most widely used tools for evaluating the quality of a clustering solution. Introduced by Rousseeuw (1987), the silhouette width quantifies how well each observation fits within its assigned cluster compared to neighboring clusters.
The Classical Silhouette
For each observation \(i\) in cluster \(C_k\), we compute:
\[s(i) = \frac{b(i) - a(i)}{\max\{a(i), b(i)\}}\]
where:
- \(a(i)\) = average distance to all other points in the same cluster
- \(b(i)\) = minimum average distance to points in any other cluster
Values range from \(-1\) (poor fit) to \(+1\) (excellent fit).
Beyond Hard Clustering
What happens when clusters overlap? Traditional silhouette methods assume hard assignments, but many real-world problems require soft (fuzzy) clustering. That’s where density-based silhouette diagnostics come in.
# Coming soon: example using the Silhouette R package
library(Silhouette)
# Fit a soft clustering model
# Compute density-based silhouette widths
# Visualize resultsWhat’s Next
In upcoming posts, I’ll walk through:
- Density-based silhouette methods for soft clustering
- Extended silhouette for block clustering
- Practical examples with the
SilhouetteR package
Stay tuned!
References
- Rousseeuw, P. J. (1987). Silhouettes: A graphical aid to the interpretation and validation of cluster analysis.
- Bhat, S. K. & Kiruthika, C. (2024). Some density-based silhouette diagnostics for soft clustering algorithms.